Strain Passport - Bacillus inaquosorum

1. Taxonomy

Taxonomy
Domain Bacteria
Phylum Firmicutes
Class Bacilli
Order Bacillales
Family Bacillaceae
Genus Bacillus
Species Bacillus inaquosorum

2. Assembly Statistics

Assembly Statistics
MAGID MAG16
Size (bp) 4100319
N.contigs 30
GC (%) 44
N50 (bp) 294993
Coding Density 89
N.CDSs 4032
Genome Completeness
Completeness 99.75
Contamination 0.56
Strain heterogeneity 0.00

3. Metabolism and Function (KEGG)

KEGG Function Annotation

Bacillus inaquosorum KEGG Functional Classification

KEGG Resistome

name Type Level1 Level2 Description KO
ko01504 Gene variants Aminoglycoside resistance genes Other acetyltransferases K19273 sat4; streptothricin acetyltransferase [EC:2.3.-.-] K19273
ko01504 Gene variants Macrolide resistance genes Transporters K18231 msr, vmlR; macrolide transport system ATP-binding/permease protein K18231
ko01504 Gene variants Macrolide resistance genes Transporters K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein K08217
ko01504 Gene variants Macrolide resistance genes Others K06880 ereA_B; erythromycin esterase [EC:3.1.1.-] K06880
ko01504 Gene variants Macrolide resistance genes Others K18235 vgb; virginiamycin B lyase [EC:4.2.99.-] K18235
ko01504 Gene variants Macrolide resistance genes Others K06979 mph; macrolide phosphotransferase K06979
ko01504 Gene variants Phenicol resistance genes Acetyltransferases K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] K19271
ko01504 Gene sets beta-Lactam resistance modules beta-Lactam resistance, Bla system [MD:M00627] K17836 penP; beta-lactamase class A [EC:3.5.2.6] K17836
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] K07260
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K18346 vanW; vancomycin resistance protein VanW K18346
ko01504 Gene sets CAMP resistance modules Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:M00725] K03367 dltA; D-alanine–poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] K03367
ko01504 Gene sets CAMP resistance modules Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:M00725] K03739 dltB; membrane protein involved in D-alanine export K03739
ko01504 Gene sets CAMP resistance modules Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:M00725] K14188 dltC; D-alanine–poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] K14188
ko01504 Gene sets CAMP resistance modules Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:M00725] K03740 dltD; D-alanine transfer protein K03740
ko01504 Gene sets CAMP resistance modules Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [MD:M00726] K14205 mprF, fmtC; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] K14205
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump AbcA [MD:M00700] K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC K18907
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump AbcA [MD:M00700] K18104 abcA, bmrA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] K18104
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump NorB [MD:M00702] K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC K18907
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump MepA [MD:M00705] K18908 mepA; multidrug efflux pump K18908

KEGG Toxins

name Type Level1 Level2 Description KO
ko02042 Type II toxins: Membrane damaging toxins Pore-forming toxins, Other K03699 tlyC; magnesium and cobalt exporter, CNNM family tlyC; magnesium and cobalt exporter, CNNM family K03699
ko02042 Type II toxins: Membrane damaging toxins Pore-forming toxins, Other K11068 hlyIII; hemolysin III hlyIII; hemolysin III K11068

KEGG Bacterial Virulence

GeneID KO Description PFAM
MAG16_IEOKDK_11080 K14956 6 kDa early secretory antigenic target Proteins of 100 residues with WXG [PF06013.15]…
MAG16_IEOKDK_13910 K03596 GTP-binding protein LepA GTP-binding protein LepA C-terminus [PF06421.15]…
MAG16_IEOKDK_15635 K08303 U32 family peptidase [EC:3.4.-.-] Peptidase family U32 [PF01136.22]…

Carbon Metabolism

Nitrogen Metabolism

4. Expert systems

AMRFinderPlus Antimicrobial Resistance

AMRFinderPlus
locus pscc.product gene_family class subclass
IEOKDK_03175 Beta-lactamase blaBSU BETA-LACTAM BETA-LACTAM
IEOKDK_05900 Chloramphenicol acetyltransferase catA PHENICOL CHLORAMPHENICOL
IEOKDK_12675 Ribosome protection protein VmlR vmlR MACROLIDE/PLEUROMUTILIN LINCOSAMIDE/STREPTOGRAMIN/TIAMULIN
IEOKDK_14550 Uncharacterized protein YcbJ mphK MACROLIDE MACROLIDE
IEOKDK_14765 Probable beta-lactamase YbxI blaOXA BETA-LACTAM CEPHALOSPORIN
IEOKDK_18150 Beta-lactamase bla BETA-LACTAM BETA-LACTAM

Virulence factors (VFDB)

## No VFDB data

5. BacDive

BacDive
Species Bacillus inaquosorum
ncbi_taxid 483913
taxid_matching_level species
type_strain no
medium_name NUTRIENT AGAR (DSMZ Medium 1)
medium_link NA
strain_history NA
gram NA
length NA
width NA
motility NA
oxygen_tolerance NA
spore NA
aggregation_score NA
GC_content NA
antibiotic_resistance_chebi NA
antibiotic_resistance_metabolite NA

6. Publications

7. U.S. Patents

First 1 patents out of 1

patent_number patent_title
10123558 Leuconostoc citreum and fermented foods using the same as a starter, and compositions thereof